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  • 105. Eugenie Reich (Part 1): Plastic Fantastic, scientific fraud, and institutional norms
    2024/11/01

    Eugenie Reich is an attorney who defends scientific whistleblowers, and a former investigative science journalist. We talk about her previous work as a science journalist, in particular her book Plastic Fantastic about one of the biggest fraud cases in physics, the case of Jan-Hendrik Schön. We'd planned to also discuss Eugenie's current work as an attorney, but spent all our time on the Schön case. Eugenie kindly agreed to do another interview, in which we cover the legal aspects of fraud, which will be the next episode (#106).

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: One of the biggest fraud cases in physics/all of science
    0:05:47: How and why Eugenie started writing about the Schön case
    0:09:26: Why did Schön commit fraud?
    0:19:30: Schön's PhD: he never saved any original data
    0:30:05: Bell Labs vs. Schön's PhD lab: long-term revolutions vs. short-term applications
    0:36:42: Schön's first work at Bell Labs was 'unpublishable'
    0:41:42: How to get away with fraud: pretend you collected data in another lab
    0:47:45: Bertram Batlogg and the role of the supervisors of fraudsters
    0:56:20: How the bursting of the Dot-Com Bubble and 9/11 may (indirectly) have exacerbated Schön's fraud
    1:01:09: How to use your colleagues' ideas to commit better fraud
    1:05:05: How Schön's fraud unraveled
    1:13:45: What is Schön doing now?
    1:18:11: A book or paper more people should read
    1:20:20: Something Eugenie wishes she'd learnt sooner
    1:22:58: Advice for PhD students/postdocs

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Eugenie's links

    • Website: https://geni.us/reich-web
    • Twitter: https://geni.us/reich-twt


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References and links

    Episode with Simine Vazire: https://geni.us/bjks-vazire
    Episode with Elisabeth Bik: https://geni.us/bjks-bik

    Bell Labs (2002). The Schon report: https://media-bell-labs-com.s3.amazonaws.com/pages/20170403_1709/misconduct-revew-report-lucent.pdf
    Reich (2009). Plastic fantastic: How the biggest fraud in physics shook the scientific world.
    Shapin & Schaffer (1985). Leviathan and the air-pump: Hobbes, Boyle, and the experimental life.

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    1 時間 27 分
  • 104. James Shine: Integrating neuroscience with fMRI, collaboration, and the importance of dumb questions
    2024/10/25

    James (Mac) Shine is a PI and fellow at the University of Sydney. We talk about his background in sports, using fMRI to integrate various parts of neuroscience, collaboration, and much more.

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: Mac's sporting background
    0:07:46: Overview of Mac's review in Nature (w/ Emily Finn and Russell Poldrack)
    0:14:03: The role of great editors in improving scientists and their work
    0:32:53: Connecting different levels of description
    0:40:07: Integration and specialisation
    0:48:49: You can scan any animal with fMRI - but they're usually anaesthetised
    0:54:13: The transfer from human fMRI to animal electrophysiology
    1:01:53: N=1 studies and layer-fMRI in clinical neuroscience
    1:16:17: Collaboration and building a multidisciplinary lab
    1:26:52: The magic formula in science: annoyance, excitement, and a constructive mindset
    1:34:51: Writing grants as a test to oneself, and the art of reframing
    1:41:52: A book or paper more people should read
    1:43:37: Something Mac wishes he'd learnt sooner
    1:45:43: Advice for PhD students/postdocs

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Mac's links

    • Website: https://geni.us/shine-web
    • Google Scholar: https://geni.us/shine-scholar
    • Twitter: https://geni.us/shine-twt


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References and links

    OHMB interview: https://www.youtube.com/watch?v=ucDj_94ovaU

    Boyden, ... & Deisseroth (2005). Millisecond-timescale, genetically targeted optical control of neural activity. Nature Neuroscience.
    Finn, Poldrack & Shine (2023). Functional neuroimaging as a catalyst for integrated neuroscience. Nature.
    Friston, ... (2017). Active inference: a process theory. Neural Computation.
    Munn, ... Larkum & Shine (2023). A thalamocortical substrate for integrated information via critical synchronous bursting. PNAS.
    Newbold, ... & Dosenbach (2020). Plasticity and spontaneous activity pulses in disused human brain circuits. Neuron.
    Pezzulo & Cisek (2016). Navigating the affordance landscape: feedback control as a process model of behavior and cognition. TiCS.
    Poldrack, ... (2015). Long-term neural and physiological phenotyping of a single human. Nature Communications.
    Rao & Ballard (1999). Predictive coding in the visual cortex: a functional interpretation of some extra-classical receptive-field effects. Nature Neuroscience.
    Shine, ... (2011). Visual misperceptions and hallucinations in Parkinson's disease: dysfunction of attentional control networks?. Movement Disorders.
    Shine, ... & Poldrack (2016). The dynamics of functional brain networks: integrated network states during cognitive task performance. Neuron.
    Shine, ... & Poldrack (2016). Temporal metastates are associated with differential patterns of time-resolved connectivity, network topology, and attention. PNAS.
    Shine & Poldrack (2018). Principles of dynamic network reconfiguration across diverse brain states. NeuroImage.

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    1 時間 48 分
  • 103. Brandon Brown: Farms not grants, academic negotiations, and unusual academic contributions
    2024/10/18

    Brandon Brown is a professor at University of California Riverside, where he studies global health and ethics. He also writes career columns for Nature and Science, which we talk about: negotiations in academia, his sabbatical, his life owning and working a farm, different types of grants and contributions in academia, and much more

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: Brandon's path to becoming a scientist
    0:20:39: Start discussing Brandon's career columns in Nature
    0:32:17: Grant applications: small vs. big
    0:41:36: Postdoc-phase: is my plan crazy?
    0:55:32: Different types of contribution/recognition in academia
    1:09:22: Negotiation in academia
    1:22:47: Contributing to team science
    1:30:30: Sabbaticals
    1:39:19: Brandon's farm
    1:48:15: A book or paper more people should read
    1:49:33: Something Brandon wishes he'd learnt sooner
    1:51:43: Advice for PhD students/postdocs

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Brandon's links

    • Website: https://geni.us/brown-web
    • Google Scholar: https://geni.us/brown-scholar
    • Twitter: https://geni.us/brown-twt


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References and links

    CAMP: https://www.campstatewide.org/
    truEvolution: https://www.truevolution.org/

    Brandon's columns (most of which we discussed):
    https://www.nature.com/articles/d41586-024-02390-w
    https://www.nature.com/articles/d41586-022-03184-8
    https://www.nature.com/articles/d41586-024-00381-5
    https://www.science.org/doi/10.1126/science.364.6447.1306
    https://www.science.org/doi/10.1126/science.372.6548.1358

    Coelho (1988). The Alchemist.

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    1 時間 53 分
  • 102: Soledad Gonzalo Cogno: Sloooow oscillations in entorhinal cortex, mentoring, and the physics approach to neuroscience
    2024/10/11

    Soledad Gonzalo Cogno is a group leader at the Kavli Institute for Science Neuroscience in Trondheim. We talk about how she went from studying physics in Argentina to working on the brain in Norway, the importance of interdisciplinary approaches to neuroscience, why researchers should give their research animals a nice life, mentorship, and discuss her recent Nature paper on ultraslow oscillatory sequences in medial entorhinal cortex.

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: Studying physics in Argentina
    0:12:30: The advantages of a physics background - interdisciplinarity in neuroscience
    0:27:31: How Soledad ended up in Trondheim
    0:32:46: Rodent heaven in Norway
    0:36:19: Start discussing Soledad's paper on ultraslow oscillatory sequences
    1:03:12: So what do those ultraslow oscillatory sequences do?
    1:16:18: A book or paper more people should read
    1:22:30: Something Soledad wishes she'd learnt sooner
    1:30:51: Advice for PhD students/postdocs

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Soledad's links

    • Website: https://geni.us/gonzalo_cogno-web
    • Twitter: https://geni.us/gonzalo_cogno-twt


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References

    Episode about Ramon y Cajal: https://geni.us/bjks-ehrlich

    Brun, Solstad, Kjelstrup, Fyhn, Witter, Moser & Moser (2008). Progressive increase in grid scale from dorsal to ventral medial entorhinal cortex. Hippocampus.
    Constantinou, Gonzalo Cogno, Elijah, Kropff, Gigg, Samengo & Montemurro (2016). Bursting neurons in the hippocampal formation encode features of LFP rhythms. Frontiers in computational neuroscience.
    Dayan & Abbott (2005). Theoretical neuroscience: computational and mathematical modeling of neural systems.
    Gonzalo Cogno, Obenhaus, Lautrup, Jacobsen, Clopath, Andersson, ... & Moser (2024). Minute-scale oscillatory sequences in medial entorhinal cortex. Nature.
    Hastie, Tibshirani & Friedman (2009). The elements of statistical learning: data mining, inference, and prediction.
    Kropff, Carmichael, Moser & Moser (2015). Speed cells in the medial entorhinal cortex. Nature.
    MacKay (2003). Information theory, inference and learning algorithms.

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    1 時間 38 分
  • 101. Julie Old: Wombats, saving endangered species, and the difficulties of studying wild animals
    2024/10/04

    Julie Old is as Associate Professor at Western Sydney University. We talk about her experiences and research with wombats, various aspects of wombat behavior, conservation efforts, challenges such as sarcoptic mange and roadkill, the Northern hairy-nosed wombat's critically endangered status and efforts to translocate them safely, and much more.

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: How Julie got into working with wombats
    0:03:14: What are wombats?
    0:11:40: How Julie started researching wombats
    0:15:34: Sarcoptic mange in wombats
    0:25:22: Saving the critically endangered Northern hairy-nosed wombat
    0:36:00: How to prevent wombats from becoming roadkill
    0:41:46: How do I know a wombat was there without seeing the wombat directly?
    0:44:11: What research could I do on wombats and (social) decision-making?
    0:47:51: How do wombats navigate in burrows?
    0:52:42: How the Australian wildfires in 19/20 affected wombats
    0:55:41: WomSAT
    0:59:29: The Wombat Foundation
    1:01:06: How to translocate a population of wombats
    1:08:35: A book or paper more people should read
    1:10:53: Something Julie wishes she'd learnt sooner
    1:12:11: Advice for PhD students/postdocs

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Julie's links

    • Website: https://geni.us/old-web
    • Google Scholar: https://geni.us/old-scholar
    • Twitter: https://geni.us/old-twt


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References & links

    The scientific park: https://en.wikipedia.org/wiki/Epping_Forest_National_Park
    The Wombat Foundation: https://www.wombatfoundation.com.au/
    WomSAT: https://www.womsat.org.au/womsat/

    French & Whatley (2002). Diary of a Wombat.
    Mayadunnage, Stannard, West & Old (2024). Spatial and temporal patterns of sarcoptic mange in wombats using the citizen science tool, WomSAT. Integrative Zoology.
    Old, Hunter & Wolfenden (2018). Who utilises bare-nosed wombat burrows?. Australian Zoologist.
    Old, Sengupta, Naraya, & Wolfenden (2018). Sarcoptic mange in wombats—A review and future research directions. Transboundary and Emerging Diseases.
    Old & Deane (2003). The detection of mature T‐and B‐cells during development of the lymphoid tissues of the tammar wallaby (Macropus eugenii). Journal of Anatomy.
    Old & Deane (2000). Development of the immune system and immunological protection in marsupial pouch young. Developmental & Comparative Immunology.
    Park (1962). The Adventures of the Muddle-headed Wombat.
    Stannard, Wynan, Wynan, Dixon Mayadunnage & Old (2021). Can virtual fences reduce wombat road mortalities?. Ecological Engineering.
    Strahan's mammals of Australia (2023).
    Woodford (2002). The secret life of wombats.

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    1 時間 14 分
  • 100. Tom Chivers: Thomas Bayes, Bayesian statistics, and science journalism
    2024/08/16

    Tom Chivers is a journalist who writes a lot about science and applied statistics. We talk about his new book on Bayesian statistics, the biography of Thomas Bayes, the history of probability theory, how Bayes can help with the replication crisis, how Tom became a journalist, and much more.

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: Tom's book about Bayes & Bayesian statistics relates to many of my previous episodes and much of my own research
    0:03:12: A brief biography of Thomas Bayes (about whom very little is known)
    0:11:00: The history of probability theory
    0:36:23: Bayesian songs
    0:43:17: Bayes & the replication crisis
    0:57:27: How Tom got into science journalism
    1:08:32: A book or paper more people should read
    1:10:05: Something Tom wishes he'd learnt sooner
    1:14:36: Advice for PhD students/postdocs/people in a transition period

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Tom's links

    • Website: https://geni.us/chivers-web
    • Twitter: https://geni.us/chivers-twt
    • Podcast: https://geni.us/chivers-pod


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References and links

    Episode with Stuart Ritchie: https://geni.us/bjks-ritchie
    Scott Alexander: https://www.astralcodexten.com/

    Bayes (1731). Divine benevolence, or an attempt to prove that the principal end of the divine providence and government is the happiness of his creatures. Being an answer to a pamphlet entitled Divine Rectitude or an inquiry concerning the moral perfections of the deity with a refutation of the notions therein advanced concerning beauty and order, the reason of punishment and the necessity of a state of trial antecedent to perfect happiness.
    Bayes (1763). An essay towards solving a problem in the doctrine of chances. Philosophical transactions of the Royal Society of London.
    Bellhouse (2004). The Reverend Thomas Bayes, FRS: a biography to celebrate the tercentenary of his birth. Project Euclid.
    Bem (2011). Feeling the future: experimental evidence for anomalous retroactive influences on cognition and affect. Journal of personality and social psychology.
    Chivers (2024). Everything is Predictable: How Bayesian Statistics Explain Our World.
    Chivers & Chivers (2021). How to read numbers: A guide to statistics in the news (and knowing when to trust them).
    Chivers (2019). The Rationalist's Guide to the Galaxy: Superintelligent AI and the Geeks Who Are Trying to Save Humanity's Future.
    Clarke [not Black, as Tom said] (2020). Piranesi.
    Goldacre (2009). Bad science.
    Goldacre (2014). Bad pharma: how drug companies mislead doctors and harm patients.
    Simmons, Nelson & Simonsohn (2011). False-positive psychology: Undisclosed flexibility in data collection and analysis allows presenting anything as significant. Psychological Science.

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    1 時間 20 分
  • 99. Laura Luebbert: gget, hunting viruses, and questionable honeybee dances
    2024/08/02

    Laura Luebbert just finished her PhD in computational biology and will soon be a postdoc with Pardis Sabeti, to hunt some viruses. We talk about how she got into biology, how she created a widely-used software project (gget) with no prior coding experience, her recent reports when she discovered questionable data in key papers about honeybee dances, and much more.

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: Why Laura studied biology in Leiden/the Netherlands (and the importance of early scientific training)
    0:13:41: How Laura ended up doing a PhD at Caltech with Lior Pachter (and how to choose one project if you're interested in many things)
    0:22:00: gget: Developing and maintaining a software tool with no prior programming experience
    0:54:07: Laura's future postdoc (with Pardis Sabeti): global virus-hunter
    0:59:34: Finding and reporting questionable data in published papers about honeybee dances
    1:36:43: A book or paper more people should read
    1:38:55: Something Laura wishes she'd learnt sooner
    1:40:38: Advice for PhD students/postdocs
    1:44:02: Bonus: should I learn Catalan?

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt


    Laura's links

    • Website: https://geni.us/luebbert-web
    • Google Scholar: https://geni.us/luebbert-scholar
    • Twitter: https://geni.us/luebbert-twt


    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References and links

    Episode with Jessica Polka: https://geni.us/bjks-polka
    Episode with Elisabeth Bik: https://geni.us/bjks-bik
    Episode with Joe Hilgard: https://geni.us/bjks-hilgard

    Prototype fund Germany: https://prototypefund.de/en/
    PubPeer: https://pubpeer.com/

    Aaronovitch (2014-). Rivers of London series.
    Frisch (1927). Aus dem Leben der Bienen.
    Luebbert, Sullivan, Carilli, Hjörleifsson, Winnett, Chari & Pachter (2023). Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv.
    Luebbert & Pachter (2023). Efficient querying of genomic reference databases with gget. Bioinformatics.
    Luebbert & Pachter (2024). The miscalibration of the honeybee odometer. arXiv.
    https://liorpachter.wordpress.com/2024/07/02/the-journal-of-scientific-integrity/

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    1 時間 52 分
  • 98. Laura Wesseldijk: Behavioural genetics, music, and the importance of twins
    2024/07/19

    Laura Wesseldijk works at the Max Planck Institute for Empirical Aesthetics in Frankfurt at the Behavioral Genetics unit in collaboration with the Department of Psychiatry at Amsterdam UMC. We talk about her research on the genetics of music and mental health, methods in behavioural genetics, the role of large samples, the importance of twins for behavioural genetics, and much more.

    BJKS Podcast is a podcast about neuroscience, psychology, and anything vaguely related, hosted by Benjamin James Kuper-Smith.

    Support the show: https://geni.us/bjks-patreon

    Timestamps
    0:00:00: Did Beethoven have bad genetics for music - or are there problems with applying (some) genetic methods to individuals?
    0:11:51: Different methods in behavioural genetics
    0:24:20: Gene x environment interactions and the difficulty of disentangling them
    0:30:30: 23andMe in genetics research
    0:37:26: Can you ask an interesting question if you need millions of people to have done a measurement?
    0:42:08: How to measure musicality (at scale)
    0:47:56: Geneticists really love twins
    0:50:41: Do critical periods in music exist?
    1:03:30: How Laura got interested in the genetics of music
    1:12:07: A book or paper more people should read
    1:16:17: Something Laura wishes she'd learnt sooner
    1:17:49: Advice for PhD students/postdocs

    Podcast links

    • Website: https://geni.us/bjks-pod
    • Twitter: https://geni.us/bjks-pod-twt

    Laura's links

    • Website: https://geni.us/wesseldijk-web
    • Google Scholar: https://geni.us/wesseldijk-scholar
    • Twitter: https://geni.us/wesseldijk-twt

    Ben's links

    • Website: https://geni.us/bjks-web
    • Google Scholar: https://geni.us/bjks-scholar
    • Twitter: https://geni.us/bjks-twt


    References
    Begg, ... & Krause (2023). Genomic analyses of hair from Ludwig van Beethoven. Current Biology.
    Harden (2021). The genetic lottery: Why DNA matters for social equality.
    Hjelmborg, ... & Kaprio, J. (2017). Lung cancer, genetic predisposition and smoking: the Nordic Twin Study of Cancer. Thorax.
    Rutherford (2020). How to argue with a racist: History, science, race and reality.
    Rutherford (2022). Control: the dark history and troubling present of eugenics.
    Ullén, Mosing, Holm, Eriksson & Madison (2014). Psychometric properties and heritability of a new online test for musicality, the Swedish Musical Discrimination Test. Personality and Individual Differences.
    Wesseldijk, Ullén & Mosing (2019). The effects of playing music on mental health outcomes. Scientific reports.
    Wesseldijk, Mosing & Ullén (2021). Why is an early start of training related to musical skills in adulthood? A genetically informative study. Psychological Science.
    Wesseldijk, Ullén & Mosing (2023). Music and genetics. Neuroscience & Biobehavioral Reviews.
    Wesseldijk, Abdellaoui, Gordon, Ullén & Mosing (2022). Using a polygenic score in a family design to understand genetic influences on musicality. Scientific reports.
    Wesseldijk, ... & Fisher (2024). Notes from Beethoven’s genome. Current Biology.

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    1 時間 21 分